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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825851.1_cds_XP_016502474.1_16109
CDS Infomation

[gene=LOC107820665] [db_xref=GeneID:107820665] [protein=probable pectate lyase 4] [protein_id=XP_016502474.1] [location=complement(join(9487..9738,12766..12834,12916..13126,13209..13560,15421..15547))] [gbkey=CDS]
Sequence

ATGGCGGTGTTACCATATTCTGATGTAGATTCGAGCTTAAAAGCGCTAGCCGGTCGAGCC
GAAGGATTTGGCAGGTTTTCCATCGGCGGTCTAAACGGTCCGGTCTATTCCGTCACTACA
TTGGCCGATGATGGTCCAGGATCACTTCGTGATGGCTGCCGTAAGAAAGAACCACTATGG
ATTGTTTTTGAAGTTTCAGGCACCATTCATCTCGCATCTTACCTACGTGTGTCATCTTAT
AAAACTATTGATGGTCGAGGCCAAAGGATAAAACTCACTGGCAAAGGCTTACAACTGAAG
GATTGTGAGCACATAATCGTATGCAATTTGGAGTTTGAAGGTGGCAGAGGTCATGACGTT
GATGGCATTCAAATAAAACCAAATTCTAGGCACATTTGGATAGACCGCTGTTCTCTTCGT
GATTATGATGATGGGCTAATCGATATAACCAGACAAAGCACAGATATCACTATTTCTAGA
TGTTATTTTGCTCAGCATGATAAGACAATGCTTATTGGAGCAGACCCATCTCATATTGGT
GATAGATGTATCAGAGTGACCATCCACCACTGCTTTTTCGATGGGACACGGCAGAGGCAA
CCTCGTGTTAGATTTGGAAAAGTTCATCTGTACAATAATTATACTAGAAATTGGGGTATA
TATGCTATTTGTGCCAGTGTAGAATCACAGGTATACTCTCAATGCAACATATACGAAGCT
ACACAGAAGAAAAAAGCTTTTGAGTATTACACAGAGAAGGCAGCAGATAAGGAAGAAGCA
AGGACAGGTTTAATCAGATCTGAAGGGGACTTGTTTCTCAAAGGAGCTCAGGGAATGTTG
TTAACTGGTGTTGGTGAAGAGTGTGTTTTTCATCCAAGTGAATTTTACCCTGTCTGGACA
TTGGAACCTGCCTCAGACTCCCTCAAAGCTGTTCTTCAAGTTTGCACTGGTTGGCAATCT
ATTTCCCGACCACCAGAAGTGTGTGCTGATCATATGAAACCTGCATGCTAG

Peptide Sequence

PEP ID

XP_016502474.1
PEP Infomation

PREDICTED: probable pectate lyase 4 [Nicotiana tabacum]
Sequence

MAVLPYSDVDSSLKALAGRAEGFGRFSIGGLNGPVYSVTTLADDGPGSLRDGCRKKEPLW
IVFEVSGTIHLASYLRVSSYKTIDGRGQRIKLTGKGLQLKDCEHIIVCNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFAQHDKTMLIGADPSHIG
DRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWGIYAICASVESQVYSQCNIYEA
TQKKKAFEYYTEKAADKEEARTGLIRSEGDLFLKGAQGMLLTGVGEECVFHPSEFYPVWT
LEPASDSLKAVLQVCTGWQSISRPPEVCADHMKPAC

Transcript Sequence

Gene sequence data has not been registered.